PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g25570.3
Common NameLR48_Vigan02g009700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 149aa    MW: 17118.9 Da    PI: 7.0938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g25570.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-202272255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+++AeIrdps++g   r +lg+f +aeeAa+a+++a+  ++g
  Vang06g25570.3 22 RYRGVRRRP-WGKYAAEIRDPSKQG--SRLWLGTFESAEEAARAYDHAAFTMRG 72
                    6********.**********98865..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.98E-292281No hitNo description
SuperFamilySSF541713.07E-232281IPR016177DNA-binding domain
PfamPF008471.2E-132272IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-322282IPR001471AP2/ERF domain
SMARTSM003802.5E-362286IPR001471AP2/ERF domain
PROSITE profilePS5103224.8032280IPR001471AP2/ERF domain